PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Bv2_037340_ewqy.t1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Betoideae; Beta
Family bHLH
Protein Properties Length: 273aa    MW: 30629.9 Da    PI: 9.0645
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Bv2_037340_ewqy.t1genomeTBVRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH17.47.9e-061732091152
                         HHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHH CS
                 HLH  11 rRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIk 52 
                         +R +++ ++++ L+el+ +      +K + a++L++A+ YIk
  Bv2_037340_ewqy.t1 173 KRSQKLSDKISALQELVSPY-----GKTDTASVLQEACIYIK 209
                         6899**************99.....9***************8 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088810.88162211IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474591.44E-8173224IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.101.1E-6177219IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 273 aa     Download sequence    Send to blast
MKSSNFMSIS CLQNHNHGGF DGLQSINSEF SMMGNNMNNN GYLGTGIENY YMEQLGYGSM  60
DVSSQLSYVS PVSYSSLMPM PMENLELASP PHLVDYRWSS PCDDFIKNDI LLAQPYKPTI  120
KDVRKCVTGA KLAQRNSVFS NMASLEGSRT SKKRKVIEQF VDTRKFKMQA PVKRSQKLSD  180
KISALQELVS PYGKTDTASV LQEACIYIKI IHQEIRRLSI SYFEGDAERQ SDLQSKGLCL  240
VPVSIMKSIT RESWGGAGDH HTASRTSRRS TYI
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010669842.10.0PREDICTED: uncharacterized protein LOC104886971 isoform X2
TrEMBLA0A0J8FP140.0A0A0J8FP14_BETVU; Uncharacterized protein
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G27660.17e-22bHLH family protein